<?xml version="1.0" encoding="ISO-8859-1"?>
<GelML xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
		xsi:schemaLocation="http://www.psidev.info/gelml/GelML-v1_1.xsd"
		xmlns:fuge="http://fuge.sourceforge.net/fuge/1.0"
		xmlns="http://www.psidev.info/gelml/1.0"
		identifier="ExPASy:GelML:180">

<cvList>
<cv fullName="PSI sepCV" URI="https://psidev.svn.sourceforge.net/svnroot/psidev/psi/sepcv/trunk/sep.obo" id="sepCV" version="1.0"/>
<cv fullName="Unit Ontology" URI="https://psidev.svn.sourceforge.net/svnroot/psidev/psi/sepcv/trunk/unit.obo" id="UO" version="1.2"/>
</cvList>


 
		
<Gel2DExperiment id="ex66:Gel2DExperiment180"
	name="2-DE and 2-DE Western blotting of OMPs of B. melitensis M5" date="2009-08-31">
	<electrophoresisType>
		<cvParam cvRef="sepCV" accession="sep:00155" name="Two-Dimensional electrophoresis"/>
	</electrophoresisType>
	<ContactRole Contact_ref="ex66:Contact25">
        <role>
		<cvParam cvRef="sepCV" accession="sep:00035" name="principle investigator"/>
		</role>
	</ContactRole>








   



   

	
<Gel2DApplication Gel2DProtocol_ref="ex66:Gel2DProtocol180" id="ex66:Gel2DAppli180">


	
	
	<inputFirstDimension>
		


<Gel id="ex66:Gel1" name="Isoelectric focusing (IEF)" separationDimension="1">
	<gelType>IPG strip,Denaturing</gelType>
	
	<GelManufactureApplication>
		
		<make name="Amersham pharmaci"/>
		<model name="IPG 4.0-7.0">
			<userParam name="Model number" value="17-1233-01"/>
		</model>
		<userParam name="Batch number" value="Amersham pharmaci 20043079"/>
		
	</GelManufactureApplication>
	<Dimensions>
		
		
		<x value="" unitName="" unitAccession="" unitCvRef="UO"/>
		<y value="" unitName="" unitAccession="" unitCvRef="UO"/>
		<z value="" unitName="" unitAccession="" unitCvRef="UO"/>
	</Dimensions>
	
	<percentAcrylamide>
		<AtomicValue><PropertyValue value=""/></AtomicValue>
	</percentAcrylamide>
	<AcrylamideToCrossLinker acrylamide="" crossLinker="">
		<crossLinkerType>
			<cvParam cvRef="sepCV" accession="" name=""/>
		</crossLinkerType>
	</AcrylamideToCrossLinker>	
</Gel>

	</inputFirstDimension>
	
   
	
	
	
	<inputSecondDimension>
		


<Gel id="ex66:Gel2" name="Sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE)" separationDimension="2">
	<gelType>slab gel,Denaturing</gelType>
	
	<GelManufactureApplication>
	
		<protocolText>
			
			

	See reference:
    Chinese J ourna1 of Zoonoses (2007) 23(12):1172-1175

	See URL: http://www.cqvip.com


		</protocolText>
		
	</GelManufactureApplication>
	<Dimensions>
		
		
		<x value="" unitName="" unitAccession="" unitCvRef="UO"/>
		<y value="" unitName="" unitAccession="" unitCvRef="UO"/>
		<z value="" unitName="" unitAccession="" unitCvRef="UO"/>
	</Dimensions>
	
	<percentAcrylamide>
		<AtomicValue><PropertyValue value=""/></AtomicValue>
	</percentAcrylamide>
	<AcrylamideToCrossLinker acrylamide="" crossLinker="">
		<crossLinkerType>
			<cvParam cvRef="sepCV" accession="" name=""/>
		</crossLinkerType>
	</AcrylamideToCrossLinker>	
</Gel>

	</inputSecondDimension>
	
   

<output>
<Gel2D id="ex66:Gel2D180">

    
	
	
    
	<PHRange dimension="1">
		<Range>
			<lowerLimit><PropertyValue value=""/></lowerLimit>
			<upperLimit><PropertyValue value=""/></upperLimit>
		</Range>
		<rangeType><cvParam cvRef="sepCV" accession="" name=""/></rangeType>
	</PHRange>
	

    
	
	
    
	
	<MolWeightRange dimension="2">
        <Range>
            <lowerLimit><PropertyValue value="" unitName="kilodaltons" unitCvRef="UO" unitAccession="UO:0000222"/></lowerLimit>
            <upperLimit><PropertyValue value="7" unitName="kilodaltons" unitCvRef="UO" unitAccession="UO:0000222"/></upperLimit>
        </Range>
		<rangeType><cvParam cvRef="sepCV" accession="sep:00019" name="logarithmic distribution"/></rangeType>
	</MolWeightRange>
	

</Gel2D>
</output>
<ChildProtocolApplications>
<!-- TO BE DONE -->

</ChildProtocolApplications>
</Gel2DApplication>

	

<ImageAcquisitionApplication Image_ref="ex66:Image76" Material_ref="ex66:Gel2D180" ImageAcquisitionProtocol_ref="ex66:ImageAcquisitionProtocol15" id="ex66:ImageAcquisitionApplication91">
	
	<protocolText>Western blotting was performed according to the method of Towbin et al. Proteins were transferred to PVDF membranes using TE77 ECL semi-dry transfer unit (0.8 mA/cm2, 1h). After completion of transfer, non-specific binding sites on the membranes were blocked for 90 min with 5% skimmed milk in TBS at 37℃. Then, PVDF membranes were incubated with primary antibody, rabbit anti-B. melitensis M5 (the agglutination titer of the pooled sera was 1:3200), diluted 1:50 in TBS containing 5% skimmed milk for 1 h at 37℃ on a gentle shaker. The membranes were rinsed in 0.1% Tween20 TBS three times, 10 min each, and incubated with goat anti-rabbit-HRP at a dilution of 1:10000 in TBS containing 5% skimmed milk for 1 h at 37℃. After washing, the blots were developed using ECL Western blotting detection reagents. The specific immunogenic protein pattern was visualized on an X-ray film. </protocolText>
	
</ImageAcquisitionApplication>



	
</Gel2DExperiment>






	
		
		
	
<GelMLDataCollection>
<Image location="http://miapegeldb.expasy.org/download/127/YcK6N7jz/" id="ex66:Image76" name="omp" bitDepth="32-bit (TrueColor)" dimensionX="1000" dimensionY="1000">
<resolution>
<AtomicValue>
    
        
    
	<PropertyValue value="400" unitAccession="UO:0000240" unitName="dots per inch" unitCvRef="UO"/>
</AtomicValue>
</resolution>
<fileFormat>
	
		
	
	<cvParam cvRef="sepCV" accession="sep:00053" name="TIFF"/>
</fileFormat>
<userParam name="Standard image orientation" value="Yes"/>
</Image>
</GelMLDataCollection>




















<GelMLProtocolCollection>

    <ElectrophoresisProtocol
name="FirstDimension"
id="ex66:ElectrophoresisProtocol194" >
<protocolText>[Protocol text in here]</protocolText>
<AddBufferAction id="ex66:AddBufferAction" SubstanceMixtureProtocol_ref="ex66:SubstanceMixtureProtocol0"/>
</ElectrophoresisProtocol>

    <ElectrophoresisProtocol
name="SecondDimension"
id="ex66:ElectrophoresisProtocol195" >
<protocolText>[Protocol text in here]</protocolText>
<AddBufferAction id="ex66:AddBufferAction" SubstanceMixtureProtocol_ref="ex66:SubstanceMixtureProtocol0"/>
</ElectrophoresisProtocol>

    
<ImageAcquisitionProtocol id="ex66:ImageAcquisitionProtocol15">
	<equipment id="ex66:GenericEquipment29" name="Imagescanner">
		<userParam name="type of equipment" value="laser scanner" cvRef="sepCV" accession="sep:00100" />
		<userParam name="make" value="Amersham pharmaci"/>
		
		<userParam name="version" value="18-1134-45"/>
		
	</equipment>
	<software id="ex66:GenericSoftware74" name="ImageMaster TM 2D platinum" version=" version5"/>
	<AutoCalibration id="ex66:AutoCalib0">
		<BooleanValue value="false"/>
	</AutoCalibration>
	
	
</ImageAcquisitionProtocol>


</GelMLProtocolCollection>

<AuditCollection>

	<Person
id="ex66:Contact25"
name="Beijing Institute of Microbiology & Epidemiology"
email="xiaozzp@eyou.com"
address="No.20 Dongda street, Fengtai District, Beijing 100071">
<affiliations
Organization_ref="ex66:Organization22"/>
</Person>

	<affiliations
Organization_ref="ex66:Organization22"
name="Department of Immunology"/>

</AuditCollection>
</GelML>



